Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ebf4Q8K4J2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Gm2559-201ENSMUST00000201323 363 ntBASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ebf4Q8K4J2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Dio3-201ENSMUST00000097228 1449 ntBASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ebf4Q8K4J2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Gm10849-201ENSMUST00000100397 618 ntBASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Gm11249-201ENSMUST00000117071 859 ntBASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Gm12382-201ENSMUST00000122005 922 ntBASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Gm27405-201ENSMUST00000184201 112 ntBASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ebf4Q8K4J2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf4Q8K4J2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf4Q8K4J2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf4Q8K4J2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf4Q8K4J2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ebf4Q8K4J2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.65□□□□□ -0.06
Ebf4Q8K4J2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf4Q8K4J2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf4Q8K4J2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf4Q8K4J2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms