Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cchcr1Q8K2I2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Cchcr1Q8K2I2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Cchcr1Q8K2I2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Cchcr1Q8K2I2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cchcr1Q8K2I2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cchcr1Q8K2I2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cchcr1Q8K2I2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19■□□□□ 0.63
Cchcr1Q8K2I2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Cchcr1Q8K2I2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cchcr1Q8K2I2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cchcr1Q8K2I2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cchcr1Q8K2I2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cchcr1Q8K2I2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.96■□□□□ 0.63
Cchcr1Q8K2I2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cchcr1Q8K2I2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cchcr1Q8K2I2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cchcr1Q8K2I2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cchcr1Q8K2I2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.96■□□□□ 0.63
Cchcr1Q8K2I2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cchcr1Q8K2I2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cchcr1Q8K2I2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cchcr1Q8K2I2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cchcr1Q8K2I2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.96■□□□□ 0.63
Cchcr1Q8K2I2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.96■□□□□ 0.63
Cchcr1Q8K2I2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.96■□□□□ 0.63
Cchcr1Q8K2I2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cchcr1Q8K2I2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cchcr1Q8K2I2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cchcr1Q8K2I2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Cchcr1Q8K2I2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms