Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Rtn1Q8K0T0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtn1Q8K0T0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtn1Q8K0T0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtn1Q8K0T0 Mir6404-201ENSMUST00000183699 94 ntBASIC18.52■□□□□ 0.56
Rtn1Q8K0T0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.52■□□□□ 0.56
Rtn1Q8K0T0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.52■□□□□ 0.56
Rtn1Q8K0T0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtn1Q8K0T0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Rtn1Q8K0T0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rtn1Q8K0T0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn1Q8K0T0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn1Q8K0T0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Rtn1Q8K0T0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.51■□□□□ 0.55
Rtn1Q8K0T0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn1Q8K0T0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rtn1Q8K0T0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rtn1Q8K0T0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.51■□□□□ 0.55
Rtn1Q8K0T0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn1Q8K0T0 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.51■□□□□ 0.55
Rtn1Q8K0T0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn1Q8K0T0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn1Q8K0T0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rtn1Q8K0T0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn1Q8K0T0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn1Q8K0T0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.51■□□□□ 0.55
Rtn1Q8K0T0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn1Q8K0T0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn1Q8K0T0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn1Q8K0T0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn1Q8K0T0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn1Q8K0T0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rtn1Q8K0T0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn1Q8K0T0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn1Q8K0T0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.5■□□□□ 0.55
Rtn1Q8K0T0 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.5■□□□□ 0.55
Rtn1Q8K0T0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn1Q8K0T0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn1Q8K0T0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn1Q8K0T0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn1Q8K0T0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rtn1Q8K0T0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rtn1Q8K0T0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn1Q8K0T0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rtn1Q8K0T0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rtn1Q8K0T0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.5■□□□□ 0.55
Rtn1Q8K0T0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Gm44454-201ENSMUST00000198541 138 ntBASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn1Q8K0T0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rtn1Q8K0T0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn1Q8K0T0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn1Q8K0T0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn1Q8K0T0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn1Q8K0T0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn1Q8K0T0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn1Q8K0T0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.48■□□□□ 0.55
Rtn1Q8K0T0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn1Q8K0T0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.48■□□□□ 0.55
Rtn1Q8K0T0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn1Q8K0T0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn1Q8K0T0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn1Q8K0T0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn1Q8K0T0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Rtn1Q8K0T0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtn1Q8K0T0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Rtn1Q8K0T0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms