Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rl1Q8K0S5 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rl1Q8K0S5 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rl1Q8K0S5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rl1Q8K0S5 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rl1Q8K0S5 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rl1Q8K0S5 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.15■□□□□ 0.18
Rtn4rl1Q8K0S5 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.15■□□□□ 0.18
Rtn4rl1Q8K0S5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Rtn4rl1Q8K0S5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rl1Q8K0S5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rl1Q8K0S5 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rl1Q8K0S5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rl1Q8K0S5 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rtn4rl1Q8K0S5 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rtn4rl1Q8K0S5 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Rtn4rl1Q8K0S5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Gm8396-201ENSMUST00000057361 823 ntBASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Rtn4rl1Q8K0S5 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Gm11025-201ENSMUST00000140773 466 ntBASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Gm18489-201ENSMUST00000172565 551 ntBASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Gm7787-201ENSMUST00000216858 688 ntBASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4rl1Q8K0S5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rl1Q8K0S5 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rl1Q8K0S5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rl1Q8K0S5 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rl1Q8K0S5 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rl1Q8K0S5 Grk6-207ENSMUST00000225925 2769 ntBASIC16.12■□□□□ 0.17
Rtn4rl1Q8K0S5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rl1Q8K0S5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rtn4rl1Q8K0S5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Rtn4rl1Q8K0S5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rl1Q8K0S5 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rtn4rl1Q8K0S5 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Rtn4rl1Q8K0S5 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.12■□□□□ 0.17
Rtn4rl1Q8K0S5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rl1Q8K0S5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rtn4rl1Q8K0S5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rl1Q8K0S5 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4rl1Q8K0S5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Rtn4rl1Q8K0S5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.12■□□□□ 0.17
Rtn4rl1Q8K0S5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rtn4rl1Q8K0S5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rl1Q8K0S5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rl1Q8K0S5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rl1Q8K0S5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rl1Q8K0S5 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rl1Q8K0S5 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.11■□□□□ 0.17
Rtn4rl1Q8K0S5 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4rl1Q8K0S5 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms