Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.12■□□□□ 0.01
Rfwd3Q8CIK8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd3Q8CIK8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd3Q8CIK8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rfwd3Q8CIK8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd3Q8CIK8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd3Q8CIK8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd3Q8CIK8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd3Q8CIK8 Gm14859-201ENSMUST00000117752 357 ntBASIC15.11■□□□□ 0.01
Rfwd3Q8CIK8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd3Q8CIK8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rfwd3Q8CIK8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd3Q8CIK8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd3Q8CIK8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd3Q8CIK8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd3Q8CIK8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd3Q8CIK8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd3Q8CIK8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd3Q8CIK8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd3Q8CIK8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfwd3Q8CIK8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.1■□□□□ 0.01
Rfwd3Q8CIK8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Olfr129-201ENSMUST00000122318 993 ntBASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Gm21362-201ENSMUST00000194272 928 ntBASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.09■□□□□ 0.01
Rfwd3Q8CIK8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rfwd3Q8CIK8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rfwd3Q8CIK8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rfwd3Q8CIK8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rfwd3Q8CIK8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rfwd3Q8CIK8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rfwd3Q8CIK8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rfwd3Q8CIK8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rfwd3Q8CIK8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Rfwd3Q8CIK8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfwd3Q8CIK8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfwd3Q8CIK8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rfwd3Q8CIK8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.08■□□□□ 0
Rfwd3Q8CIK8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rfwd3Q8CIK8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfwd3Q8CIK8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rfwd3Q8CIK8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Rfwd3Q8CIK8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfwd3Q8CIK8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.08■□□□□ 0
Rfwd3Q8CIK8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms