Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox30Q8CGW4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox30Q8CGW4 Gm22240-201ENSMUST00000175225 82 ntBASIC17.54■□□□□ 0.4
Sox30Q8CGW4 Gm29257-201ENSMUST00000186115 639 ntBASIC17.54■□□□□ 0.4
Sox30Q8CGW4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox30Q8CGW4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox30Q8CGW4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.54■□□□□ 0.4
Sox30Q8CGW4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox30Q8CGW4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox30Q8CGW4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sox30Q8CGW4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sox30Q8CGW4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox30Q8CGW4 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.54■□□□□ 0.4
Sox30Q8CGW4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox30Q8CGW4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sox30Q8CGW4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox30Q8CGW4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Gm6257-201ENSMUST00000163864 910 ntBASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Gm10052-201ENSMUST00000168019 960 ntBASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Gm45058-201ENSMUST00000205810 766 ntBASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Gm7729-201ENSMUST00000050143 801 ntBASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox30Q8CGW4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.52■□□□□ 0.4
Sox30Q8CGW4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox30Q8CGW4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sox30Q8CGW4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox30Q8CGW4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox30Q8CGW4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Sox30Q8CGW4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox30Q8CGW4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.52■□□□□ 0.4
Sox30Q8CGW4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sox30Q8CGW4 Gm37055-201ENSMUST00000191866 133 ntBASIC17.52■□□□□ 0.4
Sox30Q8CGW4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox30Q8CGW4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox30Q8CGW4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sox30Q8CGW4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.52■□□□□ 0.39
Sox30Q8CGW4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.52■□□□□ 0.39
Sox30Q8CGW4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox30Q8CGW4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox30Q8CGW4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sox30Q8CGW4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.5■□□□□ 0.39
Sox30Q8CGW4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Sox30Q8CGW4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox30Q8CGW4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Sox30Q8CGW4 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox30Q8CGW4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Sox30Q8CGW4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox30Q8CGW4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Sox30Q8CGW4 Mir5130-201ENSMUST00000175160 84 ntBASIC17.5■□□□□ 0.39
Sox30Q8CGW4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Sox30Q8CGW4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox30Q8CGW4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox30Q8CGW4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms