Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
Smc5Q8CG46 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.87■□□□□ 0.77
Smc5Q8CG46 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc5Q8CG46 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Smc5Q8CG46 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smc5Q8CG46 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Smc5Q8CG46 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc5Q8CG46 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc5Q8CG46 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc5Q8CG46 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc5Q8CG46 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smc5Q8CG46 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc5Q8CG46 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc5Q8CG46 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc5Q8CG46 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Smc5Q8CG46 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc5Q8CG46 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.86■□□□□ 0.77
Smc5Q8CG46 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc5Q8CG46 Mir5130-201ENSMUST00000175160 84 ntBASIC19.86■□□□□ 0.77
Smc5Q8CG46 Gm37722-201ENSMUST00000193757 208 ntBASIC19.86■□□□□ 0.77
Smc5Q8CG46 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smc5Q8CG46 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.86■□□□□ 0.77
Smc5Q8CG46 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc5Q8CG46 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc5Q8CG46 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc5Q8CG46 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.86■□□□□ 0.77
Smc5Q8CG46 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.86■□□□□ 0.77
Smc5Q8CG46 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc5Q8CG46 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc5Q8CG46 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Smc5Q8CG46 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc5Q8CG46 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc5Q8CG46 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.85■□□□□ 0.77
Smc5Q8CG46 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc5Q8CG46 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Smc5Q8CG46 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc5Q8CG46 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc5Q8CG46 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Smc5Q8CG46 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Smc5Q8CG46 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc5Q8CG46 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.84■□□□□ 0.77
Smc5Q8CG46 Gm7889-201ENSMUST00000185591 958 ntBASIC19.84■□□□□ 0.77
Smc5Q8CG46 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.84■□□□□ 0.77
Smc5Q8CG46 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc5Q8CG46 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc5Q8CG46 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc5Q8CG46 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Smc5Q8CG46 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc5Q8CG46 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc5Q8CG46 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc5Q8CG46 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.84■□□□□ 0.77
Smc5Q8CG46 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc5Q8CG46 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Smc5Q8CG46 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc5Q8CG46 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc5Q8CG46 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Smc5Q8CG46 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc5Q8CG46 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smc5Q8CG46 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smc5Q8CG46 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smc5Q8CG46 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smc5Q8CG46 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smc5Q8CG46 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smc5Q8CG46 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.83■□□□□ 0.77
Smc5Q8CG46 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.83■□□□□ 0.77
Smc5Q8CG46 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.83■□□□□ 0.77
Smc5Q8CG46 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smc5Q8CG46 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc5Q8CG46 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc5Q8CG46 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc5Q8CG46 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Smc5Q8CG46 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc5Q8CG46 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc5Q8CG46 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Smc5Q8CG46 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc5Q8CG46 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc5Q8CG46 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.82■□□□□ 0.76
Smc5Q8CG46 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc5Q8CG46 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms