Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Gm10013-201ENSMUST00000106074 672 ntBASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Gm11355-201ENSMUST00000121120 306 ntBASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Gm18032-201ENSMUST00000222541 538 ntBASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhb7Q8CDY9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Gm10231-201ENSMUST00000181584 441 ntBASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Gm10175-202ENSMUST00000208752 441 ntBASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb7Q8CDY9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb7Q8CDY9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb7Q8CDY9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb7Q8CDY9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb7Q8CDY9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb7Q8CDY9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb7Q8CDY9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.14■□□□□ 0.17
Pcdhb7Q8CDY9 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.14■□□□□ 0.17
Pcdhb7Q8CDY9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdhb7Q8CDY9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhb7Q8CDY9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb7Q8CDY9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb7Q8CDY9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdhb7Q8CDY9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb7Q8CDY9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb7Q8CDY9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb7Q8CDY9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb7Q8CDY9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb7Q8CDY9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb7Q8CDY9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb7Q8CDY9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdhb7Q8CDY9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb7Q8CDY9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Pcdhb7Q8CDY9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb7Q8CDY9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb7Q8CDY9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb7Q8CDY9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb7Q8CDY9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb7Q8CDY9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb7Q8CDY9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb7Q8CDY9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb7Q8CDY9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb7Q8CDY9 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.12■□□□□ 0.17
Pcdhb7Q8CDY9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms