Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cfap54Q8C6S9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Gm18889-201ENSMUST00000174284 929 ntBASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Gm43767-201ENSMUST00000198933 381 ntBASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Gm45167-201ENSMUST00000208007 322 ntBASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cfap54Q8C6S9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Gm11424-201ENSMUST00000121929 829 ntBASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Gm25948-201ENSMUST00000175334 112 ntBASIC15.28■□□□□ 0.04
Cfap54Q8C6S9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cfap54Q8C6S9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cfap54Q8C6S9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cfap54Q8C6S9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.27■□□□□ 0.04
Cfap54Q8C6S9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cfap54Q8C6S9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cfap54Q8C6S9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cfap54Q8C6S9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cfap54Q8C6S9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cfap54Q8C6S9 Mir449b-201ENSMUST00000104833 80 ntBASIC15.27■□□□□ 0.03
Cfap54Q8C6S9 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.27■□□□□ 0.03
Cfap54Q8C6S9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cfap54Q8C6S9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Cfap54Q8C6S9 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cfap54Q8C6S9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cfap54Q8C6S9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cfap54Q8C6S9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.27■□□□□ 0.03
Cfap54Q8C6S9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cfap54Q8C6S9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cfap54Q8C6S9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cfap54Q8C6S9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap54Q8C6S9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.26■□□□□ 0.03
Cfap54Q8C6S9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap54Q8C6S9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cfap54Q8C6S9 Gm15427-201ENSMUST00000117288 531 ntBASIC15.26■□□□□ 0.03
Cfap54Q8C6S9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.26■□□□□ 0.03
Cfap54Q8C6S9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms