Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Gm9172-201ENSMUST00000212092 954 ntBASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Gm5186-201ENSMUST00000218781 920 ntBASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ptcd1Q8C2E4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ptcd1Q8C2E4 Gm14701-201ENSMUST00000117156 348 ntBASIC19.69■□□□□ 0.74
Ptcd1Q8C2E4 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ptcd1Q8C2E4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.69■□□□□ 0.74
Ptcd1Q8C2E4 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC19.69■□□□□ 0.74
Ptcd1Q8C2E4 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ptcd1Q8C2E4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ptcd1Q8C2E4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Ptcd1Q8C2E4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ptcd1Q8C2E4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ptcd1Q8C2E4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.69■□□□□ 0.74
Ptcd1Q8C2E4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ptcd1Q8C2E4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ptcd1Q8C2E4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Ptcd1Q8C2E4 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ptcd1Q8C2E4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ptcd1Q8C2E4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ptcd1Q8C2E4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ptcd1Q8C2E4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ptcd1Q8C2E4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ptcd1Q8C2E4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.68■□□□□ 0.74
Ptcd1Q8C2E4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ptcd1Q8C2E4 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Ptcd1Q8C2E4 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.68■□□□□ 0.74
Ptcd1Q8C2E4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ptcd1Q8C2E4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ptcd1Q8C2E4 Gm15500-202ENSMUST00000071641 1019 ntBASIC19.68■□□□□ 0.74
Ptcd1Q8C2E4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ptcd1Q8C2E4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ptcd1Q8C2E4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ptcd1Q8C2E4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ptcd1Q8C2E4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ptcd1Q8C2E4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptcd1Q8C2E4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptcd1Q8C2E4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.67■□□□□ 0.74
Ptcd1Q8C2E4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC19.67■□□□□ 0.74
Ptcd1Q8C2E4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC19.67■□□□□ 0.74
Ptcd1Q8C2E4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptcd1Q8C2E4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC19.67■□□□□ 0.74
Ptcd1Q8C2E4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptcd1Q8C2E4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptcd1Q8C2E4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptcd1Q8C2E4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ptcd1Q8C2E4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ptcd1Q8C2E4 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.67■□□□□ 0.74
Ptcd1Q8C2E4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ptcd1Q8C2E4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ptcd1Q8C2E4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ptcd1Q8C2E4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ptcd1Q8C2E4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ptcd1Q8C2E4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.65■□□□□ 0.74
Ptcd1Q8C2E4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ptcd1Q8C2E4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ptcd1Q8C2E4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms