Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Gm8825-201ENSMUST00000182565 998 ntBASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Gm4518-201ENSMUST00000182638 718 ntBASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Gm5364-201ENSMUST00000216789 889 ntBASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Gm15590-201ENSMUST00000078419 552 ntBASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf2Q8BZT2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 Gm18622-201ENSMUST00000219361 595 ntBASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 AV026068-213ENSMUST00000223675 1171 ntBASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sh3rf2Q8BZT2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Gm13216-201ENSMUST00000117145 591 ntBASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.21■□□□□ 0.19
Sh3rf2Q8BZT2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms