Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Scfd1Q8BRF7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.29■□□□□ 0.52
Scfd1Q8BRF7 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scfd1Q8BRF7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scfd1Q8BRF7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Scfd1Q8BRF7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scfd1Q8BRF7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scfd1Q8BRF7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scfd1Q8BRF7 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scfd1Q8BRF7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scfd1Q8BRF7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scfd1Q8BRF7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Gm8344-201ENSMUST00000119813 856 ntBASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Scfd1Q8BRF7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scfd1Q8BRF7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scfd1Q8BRF7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scfd1Q8BRF7 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scfd1Q8BRF7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.27■□□□□ 0.52
Scfd1Q8BRF7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scfd1Q8BRF7 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Scfd1Q8BRF7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.27■□□□□ 0.52
Scfd1Q8BRF7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.27■□□□□ 0.52
Scfd1Q8BRF7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scfd1Q8BRF7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scfd1Q8BRF7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scfd1Q8BRF7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scfd1Q8BRF7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scfd1Q8BRF7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Scfd1Q8BRF7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Scfd1Q8BRF7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Scfd1Q8BRF7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Scfd1Q8BRF7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scfd1Q8BRF7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scfd1Q8BRF7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Scfd1Q8BRF7 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scfd1Q8BRF7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Scfd1Q8BRF7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Scfd1Q8BRF7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scfd1Q8BRF7 Gm11779-201ENSMUST00000118541 368 ntBASIC18.26■□□□□ 0.51
Scfd1Q8BRF7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scfd1Q8BRF7 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scfd1Q8BRF7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.26■□□□□ 0.51
Scfd1Q8BRF7 Gm8000-201ENSMUST00000188378 592 ntBASIC18.26■□□□□ 0.51
Scfd1Q8BRF7 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.26■□□□□ 0.51
Scfd1Q8BRF7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scfd1Q8BRF7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scfd1Q8BRF7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scfd1Q8BRF7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scfd1Q8BRF7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Scfd1Q8BRF7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Scfd1Q8BRF7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Scfd1Q8BRF7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Gm14140-201ENSMUST00000119999 995 ntBASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Gm11764-201ENSMUST00000120221 623 ntBASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scfd1Q8BRF7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms