Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rd3Q8BRE0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rd3Q8BRE0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rd3Q8BRE0 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.01■□□□□ 0.31
Rd3Q8BRE0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rd3Q8BRE0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rd3Q8BRE0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17■□□□□ 0.31
Rd3Q8BRE0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rd3Q8BRE0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rd3Q8BRE0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rd3Q8BRE0 Gm43338-201ENSMUST00000198617 2223 ntBASIC17■□□□□ 0.31
Rd3Q8BRE0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rd3Q8BRE0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rd3Q8BRE0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rd3Q8BRE0 Gm27628-201ENSMUST00000184911 107 ntBASIC17■□□□□ 0.31
Rd3Q8BRE0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17■□□□□ 0.31
Rd3Q8BRE0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17■□□□□ 0.31
Rd3Q8BRE0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17■□□□□ 0.31
Rd3Q8BRE0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rd3Q8BRE0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rd3Q8BRE0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17■□□□□ 0.31
Rd3Q8BRE0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rd3Q8BRE0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rd3Q8BRE0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Rd3Q8BRE0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rd3Q8BRE0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rd3Q8BRE0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rd3Q8BRE0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rd3Q8BRE0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rd3Q8BRE0 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.99■□□□□ 0.31
Rd3Q8BRE0 Gm13036-201ENSMUST00000117799 748 ntBASIC16.99■□□□□ 0.31
Rd3Q8BRE0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rd3Q8BRE0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rd3Q8BRE0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rd3Q8BRE0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rd3Q8BRE0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rd3Q8BRE0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rd3Q8BRE0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rd3Q8BRE0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rd3Q8BRE0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rd3Q8BRE0 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.98■□□□□ 0.31
Rd3Q8BRE0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Rd3Q8BRE0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rd3Q8BRE0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.98■□□□□ 0.31
Rd3Q8BRE0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rd3Q8BRE0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rd3Q8BRE0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Rd3Q8BRE0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.98■□□□□ 0.31
Rd3Q8BRE0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rd3Q8BRE0 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.98■□□□□ 0.31
Rd3Q8BRE0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rd3Q8BRE0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Rd3Q8BRE0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Rd3Q8BRE0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Rd3Q8BRE0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rd3Q8BRE0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rd3Q8BRE0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rd3Q8BRE0 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.97■□□□□ 0.31
Rd3Q8BRE0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rd3Q8BRE0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rd3Q8BRE0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rd3Q8BRE0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rd3Q8BRE0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Rd3Q8BRE0 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.97■□□□□ 0.31
Rd3Q8BRE0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rd3Q8BRE0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rd3Q8BRE0 Gm7222-201ENSMUST00000117512 906 ntBASIC16.97■□□□□ 0.31
Rd3Q8BRE0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rd3Q8BRE0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rd3Q8BRE0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rd3Q8BRE0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rd3Q8BRE0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.97■□□□□ 0.31
Rd3Q8BRE0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rd3Q8BRE0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rd3Q8BRE0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
Rd3Q8BRE0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rd3Q8BRE0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Rd3Q8BRE0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rd3Q8BRE0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms