Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Gm11336-201ENSMUST00000118168 334 ntBASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf4Q8BQZ5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf4Q8BQZ5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Cpsf4Q8BQZ5 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cpsf4Q8BQZ5 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Cpsf4Q8BQZ5 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cpsf4Q8BQZ5 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cpsf4Q8BQZ5 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Cpsf4Q8BQZ5 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cpsf4Q8BQZ5 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4Q8BQZ5 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4Q8BQZ5 Gm7284-201ENSMUST00000131667 944 ntBASIC15.58■□□□□ 0.08
Cpsf4Q8BQZ5 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Cpsf4Q8BQZ5 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4Q8BQZ5 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4Q8BQZ5 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4Q8BQZ5 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4Q8BQZ5 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4Q8BQZ5 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4Q8BQZ5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4Q8BQZ5 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.58■□□□□ 0.08
Cpsf4Q8BQZ5 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.58■□□□□ 0.08
Cpsf4Q8BQZ5 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cpsf4Q8BQZ5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4Q8BQZ5 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4Q8BQZ5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4Q8BQZ5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4Q8BQZ5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4Q8BQZ5 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4Q8BQZ5 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms