Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Gm26571-201ENSMUST00000181399 666 ntBASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Gm10517-202ENSMUST00000192970 758 ntBASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Gm42545-201ENSMUST00000202755 922 ntBASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smco3Q8BQM7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smco3Q8BQM7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Smco3Q8BQM7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smco3Q8BQM7 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smco3Q8BQM7 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smco3Q8BQM7 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Smco3Q8BQM7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Smco3Q8BQM7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smco3Q8BQM7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Smco3Q8BQM7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smco3Q8BQM7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Smco3Q8BQM7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smco3Q8BQM7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Gm10849-201ENSMUST00000100397 618 ntBASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Gm24841-201ENSMUST00000158676 357 ntBASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Gm18025-201ENSMUST00000221733 862 ntBASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.26□□□□□ -0.29
Smco3Q8BQM7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smco3Q8BQM7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco3Q8BQM7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco3Q8BQM7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco3Q8BQM7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco3Q8BQM7 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco3Q8BQM7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco3Q8BQM7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco3Q8BQM7 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Smco3Q8BQM7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco3Q8BQM7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smco3Q8BQM7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Smco3Q8BQM7 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Smco3Q8BQM7 Gm12896-201ENSMUST00000118430 226 ntBASIC13.25□□□□□ -0.29
Smco3Q8BQM7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms