Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc40Q8BI79 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc40Q8BI79 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 Gm18032-201ENSMUST00000222541 538 ntBASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc40Q8BI79 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ccdc40Q8BI79 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 Gm9987-201ENSMUST00000069768 567 ntBASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc40Q8BI79 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms