Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1l4Q8BGJ9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
U2af1l4Q8BGJ9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1l4Q8BGJ9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1l4Q8BGJ9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.9■□□□□ 0.62
U2af1l4Q8BGJ9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1l4Q8BGJ9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1l4Q8BGJ9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1l4Q8BGJ9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
U2af1l4Q8BGJ9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
U2af1l4Q8BGJ9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
U2af1l4Q8BGJ9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
U2af1l4Q8BGJ9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
U2af1l4Q8BGJ9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.89■□□□□ 0.61
U2af1l4Q8BGJ9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1l4Q8BGJ9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.89■□□□□ 0.61
U2af1l4Q8BGJ9 Gm8000-201ENSMUST00000188378 592 ntBASIC18.89■□□□□ 0.61
U2af1l4Q8BGJ9 Gm36967-201ENSMUST00000193814 266 ntBASIC18.89■□□□□ 0.61
U2af1l4Q8BGJ9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1l4Q8BGJ9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
U2af1l4Q8BGJ9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1l4Q8BGJ9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1l4Q8BGJ9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
U2af1l4Q8BGJ9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1l4Q8BGJ9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1l4Q8BGJ9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1l4Q8BGJ9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
U2af1l4Q8BGJ9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Gm2213-201ENSMUST00000197485 688 ntBASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
U2af1l4Q8BGJ9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1l4Q8BGJ9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1l4Q8BGJ9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1l4Q8BGJ9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1l4Q8BGJ9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1l4Q8BGJ9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1l4Q8BGJ9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1l4Q8BGJ9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1l4Q8BGJ9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1l4Q8BGJ9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1l4Q8BGJ9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1l4Q8BGJ9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1l4Q8BGJ9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
U2af1l4Q8BGJ9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
U2af1l4Q8BGJ9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
U2af1l4Q8BGJ9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.87■□□□□ 0.61
U2af1l4Q8BGJ9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
U2af1l4Q8BGJ9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms