Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Samm50Q8BGH2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Samm50Q8BGH2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Samm50Q8BGH2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Samm50Q8BGH2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Samm50Q8BGH2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Samm50Q8BGH2 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Samm50Q8BGH2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
Samm50Q8BGH2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Samm50Q8BGH2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Samm50Q8BGH2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.84■□□□□ 0.61
Samm50Q8BGH2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Samm50Q8BGH2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Samm50Q8BGH2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Samm50Q8BGH2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Samm50Q8BGH2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Samm50Q8BGH2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Samm50Q8BGH2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Samm50Q8BGH2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Samm50Q8BGH2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Samm50Q8BGH2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.84■□□□□ 0.61
Samm50Q8BGH2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Samm50Q8BGH2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Samm50Q8BGH2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Samm50Q8BGH2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Samm50Q8BGH2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Samm50Q8BGH2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.83■□□□□ 0.61
Samm50Q8BGH2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Samm50Q8BGH2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
Samm50Q8BGH2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.83■□□□□ 0.61
Samm50Q8BGH2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Samm50Q8BGH2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Samm50Q8BGH2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Samm50Q8BGH2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Samm50Q8BGH2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Samm50Q8BGH2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Samm50Q8BGH2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.83■□□□□ 0.6
Samm50Q8BGH2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Samm50Q8BGH2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Samm50Q8BGH2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.83■□□□□ 0.6
Samm50Q8BGH2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Gm13186-201ENSMUST00000118031 316 ntBASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Samm50Q8BGH2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Samm50Q8BGH2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Phf7-203ENSMUST00000226565 1971 ntBASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Gm14859-201ENSMUST00000117752 357 ntBASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Gm11336-201ENSMUST00000118168 334 ntBASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Samm50Q8BGH2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Samm50Q8BGH2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms