Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Upk3bQ80YF6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Gm18421-201ENSMUST00000204122 625 ntBASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk3bQ80YF6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Upk3bQ80YF6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Upk3bQ80YF6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Upk3bQ80YF6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Upk3bQ80YF6 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3bQ80YF6 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.58□□□□□ -0.24
Upk3bQ80YF6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3bQ80YF6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.58□□□□□ -0.24
Upk3bQ80YF6 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3bQ80YF6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3bQ80YF6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3bQ80YF6 Gm20760-201ENSMUST00000179197 648 ntBASIC13.58□□□□□ -0.24
Upk3bQ80YF6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3bQ80YF6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.58□□□□□ -0.24
Upk3bQ80YF6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3bQ80YF6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Upk3bQ80YF6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk3bQ80YF6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.58□□□□□ -0.24
Upk3bQ80YF6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.57□□□□□ -0.24
Upk3bQ80YF6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms