Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nucks1Q80XU3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nucks1Q80XU3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nucks1Q80XU3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Nucks1Q80XU3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nucks1Q80XU3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nucks1Q80XU3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nucks1Q80XU3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nucks1Q80XU3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.18■□□□□ 0.34
Nucks1Q80XU3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nucks1Q80XU3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nucks1Q80XU3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nucks1Q80XU3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nucks1Q80XU3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nucks1Q80XU3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nucks1Q80XU3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nucks1Q80XU3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nucks1Q80XU3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nucks1Q80XU3 Gm10252-201ENSMUST00000209541 832 ntBASIC17.18■□□□□ 0.34
Nucks1Q80XU3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nucks1Q80XU3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nucks1Q80XU3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nucks1Q80XU3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nucks1Q80XU3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nucks1Q80XU3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nucks1Q80XU3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nucks1Q80XU3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Nucks1Q80XU3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nucks1Q80XU3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nucks1Q80XU3 Gm11355-201ENSMUST00000121120 306 ntBASIC17.17■□□□□ 0.34
Nucks1Q80XU3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.17■□□□□ 0.34
Nucks1Q80XU3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Nucks1Q80XU3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
Nucks1Q80XU3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nucks1Q80XU3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nucks1Q80XU3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.17■□□□□ 0.34
Nucks1Q80XU3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nucks1Q80XU3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Nucks1Q80XU3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nucks1Q80XU3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nucks1Q80XU3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nucks1Q80XU3 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.17■□□□□ 0.34
Nucks1Q80XU3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.17■□□□□ 0.34
Nucks1Q80XU3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nucks1Q80XU3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nucks1Q80XU3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nucks1Q80XU3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.15■□□□□ 0.34
Nucks1Q80XU3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nucks1Q80XU3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nucks1Q80XU3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nucks1Q80XU3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.15■□□□□ 0.34
Nucks1Q80XU3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.15■□□□□ 0.34
Nucks1Q80XU3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.15■□□□□ 0.34
Nucks1Q80XU3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nucks1Q80XU3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.15■□□□□ 0.34
Nucks1Q80XU3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nucks1Q80XU3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nucks1Q80XU3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nucks1Q80XU3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nucks1Q80XU3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nucks1Q80XU3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nucks1Q80XU3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nucks1Q80XU3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nucks1Q80XU3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nucks1Q80XU3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nucks1Q80XU3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nucks1Q80XU3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nucks1Q80XU3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Nucks1Q80XU3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nucks1Q80XU3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nucks1Q80XU3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nucks1Q80XU3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nucks1Q80XU3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nucks1Q80XU3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.14■□□□□ 0.33
Nucks1Q80XU3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nucks1Q80XU3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nucks1Q80XU3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.14■□□□□ 0.33
Nucks1Q80XU3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nucks1Q80XU3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Nucks1Q80XU3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms