Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm3Q80WV7 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm3Q80WV7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm3Q80WV7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Gm3375-201ENSMUST00000203929 796 ntBASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Timm23-208ENSMUST00000226683 750 ntBASIC16.74■□□□□ 0.27
Srrm3Q80WV7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Srrm3Q80WV7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Srrm3Q80WV7 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm3Q80WV7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm3Q80WV7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm3Q80WV7 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm3Q80WV7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.72■□□□□ 0.27
Srrm3Q80WV7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm3Q80WV7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm3Q80WV7 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm3Q80WV7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm3Q80WV7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm3Q80WV7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm3Q80WV7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Srrm3Q80WV7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm3Q80WV7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm3Q80WV7 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm3Q80WV7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Srrm3Q80WV7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm3Q80WV7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Gm7284-201ENSMUST00000131667 944 ntBASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Srrm3Q80WV7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms