Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim36Q80WG7 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim36Q80WG7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim36Q80WG7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim36Q80WG7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.52■□□□□ 0.08
Trim36Q80WG7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trim36Q80WG7 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim36Q80WG7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim36Q80WG7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim36Q80WG7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim36Q80WG7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.52■□□□□ 0.07
Trim36Q80WG7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim36Q80WG7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
Trim36Q80WG7 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim36Q80WG7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim36Q80WG7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim36Q80WG7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Gm13474-201ENSMUST00000122466 815 ntBASIC15.51■□□□□ 0.07
Trim36Q80WG7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim36Q80WG7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim36Q80WG7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim36Q80WG7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim36Q80WG7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim36Q80WG7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim36Q80WG7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim36Q80WG7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim36Q80WG7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trim36Q80WG7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim36Q80WG7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim36Q80WG7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim36Q80WG7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim36Q80WG7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.5■□□□□ 0.07
Trim36Q80WG7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim36Q80WG7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim36Q80WG7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim36Q80WG7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim36Q80WG7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.49■□□□□ 0.07
Trim36Q80WG7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Gm33142-201ENSMUST00000193913 867 ntBASIC15.49■□□□□ 0.07
Trim36Q80WG7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim36Q80WG7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim36Q80WG7 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.48■□□□□ 0.07
Trim36Q80WG7 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim36Q80WG7 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim36Q80WG7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim36Q80WG7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim36Q80WG7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim36Q80WG7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.48■□□□□ 0.07
Trim36Q80WG7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim36Q80WG7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim36Q80WG7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim36Q80WG7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim36Q80WG7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim36Q80WG7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim36Q80WG7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim36Q80WG7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms