Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Prpf40bQ80W14 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf40bQ80W14 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf40bQ80W14 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf40bQ80W14 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf40bQ80W14 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf40bQ80W14 Gm13418-201ENSMUST00000119097 944 ntBASIC18.47■□□□□ 0.55
Prpf40bQ80W14 Gm26308-201ENSMUST00000157768 69 ntBASIC18.47■□□□□ 0.55
Prpf40bQ80W14 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.47■□□□□ 0.55
Prpf40bQ80W14 Gm18421-201ENSMUST00000204122 625 ntBASIC18.47■□□□□ 0.55
Prpf40bQ80W14 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Prpf40bQ80W14 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf40bQ80W14 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf40bQ80W14 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf40bQ80W14 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf40bQ80W14 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf40bQ80W14 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Prpf40bQ80W14 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf40bQ80W14 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf40bQ80W14 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf40bQ80W14 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.47■□□□□ 0.55
Prpf40bQ80W14 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.47■□□□□ 0.55
Prpf40bQ80W14 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf40bQ80W14 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Gm14140-201ENSMUST00000119999 995 ntBASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf40bQ80W14 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Prpf40bQ80W14 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Prpf40bQ80W14 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf40bQ80W14 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.45■□□□□ 0.54
Prpf40bQ80W14 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf40bQ80W14 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf40bQ80W14 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf40bQ80W14 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf40bQ80W14 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf40bQ80W14 Gm14057-201ENSMUST00000120631 482 ntBASIC18.45■□□□□ 0.54
Prpf40bQ80W14 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf40bQ80W14 Gm9727-201ENSMUST00000161387 555 ntBASIC18.45■□□□□ 0.54
Prpf40bQ80W14 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Prpf40bQ80W14 Gm6089-201ENSMUST00000197666 938 ntBASIC18.45■□□□□ 0.54
Prpf40bQ80W14 Gm5186-201ENSMUST00000218781 920 ntBASIC18.45■□□□□ 0.54
Prpf40bQ80W14 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.45■□□□□ 0.54
Prpf40bQ80W14 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf40bQ80W14 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Prpf40bQ80W14 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf40bQ80W14 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf40bQ80W14 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf40bQ80W14 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Prpf40bQ80W14 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf40bQ80W14 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf40bQ80W14 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf40bQ80W14 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.44■□□□□ 0.54
Prpf40bQ80W14 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms