Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc2Q80VA5 Gm6089-201ENSMUST00000197666 938 ntBASIC17.45■□□□□ 0.38
Sh3tc2Q80VA5 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc2Q80VA5 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc2Q80VA5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Sh3tc2Q80VA5 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.45■□□□□ 0.38
Sh3tc2Q80VA5 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc2Q80VA5 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc2Q80VA5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc2Q80VA5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc2Q80VA5 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc2Q80VA5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc2Q80VA5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.45■□□□□ 0.38
Sh3tc2Q80VA5 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc2Q80VA5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc2Q80VA5 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc2Q80VA5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 Gm6550-201ENSMUST00000187574 993 ntBASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 AV026068-213ENSMUST00000223675 1171 ntBASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc2Q80VA5 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc2Q80VA5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sh3tc2Q80VA5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc2Q80VA5 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc2Q80VA5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc2Q80VA5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc2Q80VA5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Sh3tc2Q80VA5 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.43■□□□□ 0.38
Sh3tc2Q80VA5 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc2Q80VA5 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.43■□□□□ 0.38
Sh3tc2Q80VA5 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.43■□□□□ 0.38
Sh3tc2Q80VA5 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.43■□□□□ 0.38
Sh3tc2Q80VA5 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc2Q80VA5 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sh3tc2Q80VA5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sh3tc2Q80VA5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sh3tc2Q80VA5 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc2Q80VA5 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc2Q80VA5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.43■□□□□ 0.38
Sh3tc2Q80VA5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc2Q80VA5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Gm9727-201ENSMUST00000161387 555 ntBASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Gm27628-201ENSMUST00000184911 107 ntBASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3tc2Q80VA5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3tc2Q80VA5 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.41■□□□□ 0.38
Sh3tc2Q80VA5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3tc2Q80VA5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3tc2Q80VA5 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3tc2Q80VA5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3tc2Q80VA5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3tc2Q80VA5 Gm8097-201ENSMUST00000117903 829 ntBASIC17.41■□□□□ 0.38
Sh3tc2Q80VA5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.41■□□□□ 0.38
Sh3tc2Q80VA5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.41■□□□□ 0.38
Sh3tc2Q80VA5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3tc2Q80VA5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3tc2Q80VA5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3tc2Q80VA5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3tc2Q80VA5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms