Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38bQ80SY5 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.75■□□□□ 0.27
Prpf38bQ80SY5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38bQ80SY5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38bQ80SY5 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38bQ80SY5 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38bQ80SY5 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf38bQ80SY5 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38bQ80SY5 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38bQ80SY5 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38bQ80SY5 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.71■□□□□ 0.27
Prpf38bQ80SY5 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38bQ80SY5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Prpf38bQ80SY5 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Prpf38bQ80SY5 Gm9727-201ENSMUST00000161387 555 ntBASIC16.71■□□□□ 0.27
Prpf38bQ80SY5 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Prpf38bQ80SY5 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.71■□□□□ 0.27
Prpf38bQ80SY5 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38bQ80SY5 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38bQ80SY5 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38bQ80SY5 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Prpf38bQ80SY5 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38bQ80SY5 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38bQ80SY5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38bQ80SY5 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38bQ80SY5 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38bQ80SY5 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf38bQ80SY5 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Prpf38bQ80SY5 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms