Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdh8Q7TSK3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Gm6296-201ENSMUST00000222599 943 ntBASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdh8Q7TSK3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh8Q7TSK3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh8Q7TSK3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh8Q7TSK3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh8Q7TSK3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pcdh8Q7TSK3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pcdh8Q7TSK3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh8Q7TSK3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh8Q7TSK3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdh8Q7TSK3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.78■□□□□ 0.12
Pcdh8Q7TSK3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Pcdh8Q7TSK3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms