Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nphp3Q7TNH6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Gm12497-201ENSMUST00000138778 237 ntBASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Gm9172-201ENSMUST00000212092 954 ntBASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nphp3Q7TNH6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Nphp3Q7TNH6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp3Q7TNH6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp3Q7TNH6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp3Q7TNH6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.44■□□□□ 0.7
Nphp3Q7TNH6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Nphp3Q7TNH6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp3Q7TNH6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp3Q7TNH6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp3Q7TNH6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp3Q7TNH6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Nphp3Q7TNH6 Gm4459-201ENSMUST00000118750 468 ntBASIC19.44■□□□□ 0.7
Nphp3Q7TNH6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.44■□□□□ 0.7
Nphp3Q7TNH6 Mzt1-203ENSMUST00000227948 952 ntBASIC19.44■□□□□ 0.7
Nphp3Q7TNH6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp3Q7TNH6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp3Q7TNH6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp3Q7TNH6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp3Q7TNH6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nphp3Q7TNH6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Gm11452-201ENSMUST00000122376 690 ntBASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nphp3Q7TNH6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp3Q7TNH6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp3Q7TNH6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp3Q7TNH6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp3Q7TNH6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp3Q7TNH6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp3Q7TNH6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp3Q7TNH6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nphp3Q7TNH6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp3Q7TNH6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Nphp3Q7TNH6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.42■□□□□ 0.7
Nphp3Q7TNH6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.42■□□□□ 0.7
Nphp3Q7TNH6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nphp3Q7TNH6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms