Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf139Q7TMV1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Gm12895-201ENSMUST00000122214 226 ntBASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf139Q7TMV1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 Gm15165-201ENSMUST00000118140 502 ntBASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf139Q7TMV1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Gm9103-201ENSMUST00000119371 405 ntBASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Gm15372-201ENSMUST00000120729 834 ntBASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Gm28033-201ENSMUST00000184224 96 ntBASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Gm27867-201ENSMUST00000184778 125 ntBASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf139Q7TMV1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf139Q7TMV1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf139Q7TMV1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rnf139Q7TMV1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf139Q7TMV1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf139Q7TMV1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf139Q7TMV1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Rnf139Q7TMV1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rnf139Q7TMV1 Gm25406-201ENSMUST00000157599 105 ntBASIC17.13■□□□□ 0.33
Rnf139Q7TMV1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.13■□□□□ 0.33
Rnf139Q7TMV1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.13■□□□□ 0.33
Rnf139Q7TMV1 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.13■□□□□ 0.33
Rnf139Q7TMV1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf139Q7TMV1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf139Q7TMV1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms