Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.8■□□□□ 0.76
Ddx58Q6Q899 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.8■□□□□ 0.76
Ddx58Q6Q899 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx58Q6Q899 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Ddx58Q6Q899 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx58Q6Q899 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx58Q6Q899 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx58Q6Q899 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ddx58Q6Q899 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Gm6257-201ENSMUST00000163864 910 ntBASIC19.79■□□□□ 0.76
Ddx58Q6Q899 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Gm27646-201ENSMUST00000183989 110 ntBASIC19.79■□□□□ 0.76
Ddx58Q6Q899 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Gm15590-201ENSMUST00000078419 552 ntBASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ddx58Q6Q899 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx58Q6Q899 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx58Q6Q899 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.78■□□□□ 0.76
Ddx58Q6Q899 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Ddx58Q6Q899 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx58Q6Q899 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx58Q6Q899 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ddx58Q6Q899 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx58Q6Q899 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx58Q6Q899 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx58Q6Q899 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.78■□□□□ 0.76
Ddx58Q6Q899 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx58Q6Q899 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.78■□□□□ 0.76
Ddx58Q6Q899 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx58Q6Q899 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.78■□□□□ 0.76
Ddx58Q6Q899 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx58Q6Q899 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx58Q6Q899 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx58Q6Q899 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx58Q6Q899 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx58Q6Q899 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx58Q6Q899 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx58Q6Q899 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Ddx58Q6Q899 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx58Q6Q899 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx58Q6Q899 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.77■□□□□ 0.76
Ddx58Q6Q899 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.77■□□□□ 0.76
Ddx58Q6Q899 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.77■□□□□ 0.76
Ddx58Q6Q899 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.77■□□□□ 0.76
Ddx58Q6Q899 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx58Q6Q899 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Ddx58Q6Q899 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx58Q6Q899 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx58Q6Q899 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx58Q6Q899 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx58Q6Q899 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx58Q6Q899 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ddx58Q6Q899 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ddx58Q6Q899 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ddx58Q6Q899 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Ddx58Q6Q899 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Gm13036-201ENSMUST00000117799 748 ntBASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Gm8344-201ENSMUST00000119813 856 ntBASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Gm5364-201ENSMUST00000216789 889 ntBASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.76■□□□□ 0.75
Ddx58Q6Q899 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx58Q6Q899 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms