Protein–RNA interactions for Protein: Q6PIJ4

Nfrkb, Nuclear factor related to kappa-B-binding protein, mousemouse

Known RBP Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfrkbQ6PIJ4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NfrkbQ6PIJ4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NfrkbQ6PIJ4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NfrkbQ6PIJ4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NfrkbQ6PIJ4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfrkbQ6PIJ4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfrkbQ6PIJ4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfrkbQ6PIJ4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
NfrkbQ6PIJ4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfrkbQ6PIJ4 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfrkbQ6PIJ4 Gm8097-201ENSMUST00000117903 829 ntBASIC18.07■□□□□ 0.48
NfrkbQ6PIJ4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.07■□□□□ 0.48
NfrkbQ6PIJ4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.07■□□□□ 0.48
NfrkbQ6PIJ4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfrkbQ6PIJ4 Gm15590-201ENSMUST00000078419 552 ntBASIC18.07■□□□□ 0.48
NfrkbQ6PIJ4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfrkbQ6PIJ4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfrkbQ6PIJ4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NfrkbQ6PIJ4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfrkbQ6PIJ4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfrkbQ6PIJ4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NfrkbQ6PIJ4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NfrkbQ6PIJ4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Gm6550-201ENSMUST00000187574 993 ntBASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Gm9172-201ENSMUST00000212092 954 ntBASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Gm8655-201ENSMUST00000221159 852 ntBASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NfrkbQ6PIJ4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 Gm11780-201ENSMUST00000136880 516 ntBASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 Gm36967-201ENSMUST00000193814 266 ntBASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NfrkbQ6PIJ4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.04■□□□□ 0.48
NfrkbQ6PIJ4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NfrkbQ6PIJ4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NfrkbQ6PIJ4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
NfrkbQ6PIJ4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NfrkbQ6PIJ4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NfrkbQ6PIJ4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms