Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snrnp40Q6PE01 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Gm7787-201ENSMUST00000216858 688 ntBASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Snrnp40Q6PE01 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Mir6956-201ENSMUST00000183598 62 ntBASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snrnp40Q6PE01 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Snrnp40Q6PE01 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Snrnp40Q6PE01 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms