Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chd4Q6PDQ2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chd4Q6PDQ2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chd4Q6PDQ2 Gm13332-201ENSMUST00000120451 1398 ntBASIC20.8■□□□□ 0.92
Chd4Q6PDQ2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chd4Q6PDQ2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.8■□□□□ 0.92
Chd4Q6PDQ2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chd4Q6PDQ2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC20.8■□□□□ 0.92
Chd4Q6PDQ2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chd4Q6PDQ2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Chd4Q6PDQ2 Gm12008-201ENSMUST00000117791 755 ntBASIC20.8■□□□□ 0.92
Chd4Q6PDQ2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.8■□□□□ 0.92
Chd4Q6PDQ2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC20.8■□□□□ 0.92
Chd4Q6PDQ2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Chd4Q6PDQ2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chd4Q6PDQ2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chd4Q6PDQ2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd4Q6PDQ2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd4Q6PDQ2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd4Q6PDQ2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Chd4Q6PDQ2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd4Q6PDQ2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC20.79■□□□□ 0.92
Chd4Q6PDQ2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC20.79■□□□□ 0.92
Chd4Q6PDQ2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Chd4Q6PDQ2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd4Q6PDQ2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chd4Q6PDQ2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd4Q6PDQ2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd4Q6PDQ2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd4Q6PDQ2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chd4Q6PDQ2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd4Q6PDQ2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd4Q6PDQ2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd4Q6PDQ2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd4Q6PDQ2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Chd4Q6PDQ2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 Gm45612-201ENSMUST00000211320 160 ntBASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Chd4Q6PDQ2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd4Q6PDQ2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Chd4Q6PDQ2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd4Q6PDQ2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd4Q6PDQ2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chd4Q6PDQ2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC20.77■□□□□ 0.92
Chd4Q6PDQ2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd4Q6PDQ2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chd4Q6PDQ2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC20.77■□□□□ 0.92
Chd4Q6PDQ2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd4Q6PDQ2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd4Q6PDQ2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd4Q6PDQ2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.77■□□□□ 0.92
Chd4Q6PDQ2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd4Q6PDQ2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Chd4Q6PDQ2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chd4Q6PDQ2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC20.77■□□□□ 0.91
Chd4Q6PDQ2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chd4Q6PDQ2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.76■□□□□ 0.91
Chd4Q6PDQ2 Gm11745-201ENSMUST00000121669 448 ntBASIC20.76■□□□□ 0.91
Chd4Q6PDQ2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Chd4Q6PDQ2 Gm38327-201ENSMUST00000195852 1755 ntBASIC20.76■□□□□ 0.91
Chd4Q6PDQ2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd4Q6PDQ2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.76■□□□□ 0.91
Chd4Q6PDQ2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Chd4Q6PDQ2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chd4Q6PDQ2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd4Q6PDQ2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd4Q6PDQ2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Chd4Q6PDQ2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Chd4Q6PDQ2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd4Q6PDQ2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Chd4Q6PDQ2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd4Q6PDQ2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd4Q6PDQ2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC20.76■□□□□ 0.91
Chd4Q6PDQ2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chd4Q6PDQ2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.76■□□□□ 0.91
Chd4Q6PDQ2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC20.75■□□□□ 0.91
Chd4Q6PDQ2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC20.75■□□□□ 0.91
Chd4Q6PDQ2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC20.75■□□□□ 0.91
Chd4Q6PDQ2 Gm26308-201ENSMUST00000157768 69 ntBASIC20.75■□□□□ 0.91
Chd4Q6PDQ2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Chd4Q6PDQ2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd4Q6PDQ2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms