Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col11a2Q64739 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col11a2Q64739 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col11a2Q64739 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col11a2Q64739 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col11a2Q64739 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.32■□□□□ 0.68
Col11a2Q64739 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col11a2Q64739 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.32■□□□□ 0.68
Col11a2Q64739 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col11a2Q64739 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col11a2Q64739 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col11a2Q64739 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col11a2Q64739 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Col11a2Q64739 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.32■□□□□ 0.68
Col11a2Q64739 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.32■□□□□ 0.68
Col11a2Q64739 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Col11a2Q64739 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col11a2Q64739 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col11a2Q64739 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col11a2Q64739 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Col11a2Q64739 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC19.31■□□□□ 0.68
Col11a2Q64739 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col11a2Q64739 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col11a2Q64739 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Col11a2Q64739 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col11a2Q64739 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC19.31■□□□□ 0.68
Col11a2Q64739 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col11a2Q64739 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col11a2Q64739 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col11a2Q64739 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Col11a2Q64739 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col11a2Q64739 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col11a2Q64739 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col11a2Q64739 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col11a2Q64739 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col11a2Q64739 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col11a2Q64739 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.31■□□□□ 0.68
Col11a2Q64739 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Col11a2Q64739 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col11a2Q64739 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Col11a2Q64739 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col11a2Q64739 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col11a2Q64739 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col11a2Q64739 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Col11a2Q64739 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Col11a2Q64739 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Col11a2Q64739 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Col11a2Q64739 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col11a2Q64739 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col11a2Q64739 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Col11a2Q64739 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col11a2Q64739 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Col11a2Q64739 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col11a2Q64739 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col11a2Q64739 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col11a2Q64739 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.3■□□□□ 0.68
Col11a2Q64739 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col11a2Q64739 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col11a2Q64739 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col11a2Q64739 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col11a2Q64739 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC19.29■□□□□ 0.68
Col11a2Q64739 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Col11a2Q64739 H2-Pa-201ENSMUST00000182803 626 ntBASIC19.29■□□□□ 0.68
Col11a2Q64739 Gm27437-201ENSMUST00000183429 107 ntBASIC19.29■□□□□ 0.68
Col11a2Q64739 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19.29■□□□□ 0.68
Col11a2Q64739 Wdyhv1-203ENSMUST00000226889 394 ntBASIC19.29■□□□□ 0.68
Col11a2Q64739 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col11a2Q64739 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col11a2Q64739 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col11a2Q64739 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col11a2Q64739 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col11a2Q64739 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col11a2Q64739 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col11a2Q64739 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col11a2Q64739 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col11a2Q64739 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col11a2Q64739 Gm43767-201ENSMUST00000198933 381 ntBASIC19.28■□□□□ 0.68
Col11a2Q64739 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col11a2Q64739 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col11a2Q64739 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col11a2Q64739 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col11a2Q64739 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Col11a2Q64739 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col11a2Q64739 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Col11a2Q64739 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col11a2Q64739 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col11a2Q64739 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
Col11a2Q64739 Grk6-207ENSMUST00000225925 2769 ntBASIC19.28■□□□□ 0.68
Col11a2Q64739 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.28■□□□□ 0.68
Col11a2Q64739 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col11a2Q64739 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.28■□□□□ 0.68
Col11a2Q64739 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col11a2Q64739 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col11a2Q64739 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col11a2Q64739 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC19.28■□□□□ 0.68
Col11a2Q64739 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col11a2Q64739 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col11a2Q64739 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col11a2Q64739 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.27■□□□□ 0.68
Col11a2Q64739 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms