Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn1Q64347 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn1Q64347 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn1Q64347 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn1Q64347 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC20.25■□□□□ 0.83
Clcn1Q64347 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn1Q64347 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Clcn1Q64347 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn1Q64347 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn1Q64347 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.25■□□□□ 0.83
Clcn1Q64347 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcn1Q64347 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn1Q64347 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn1Q64347 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Clcn1Q64347 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn1Q64347 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn1Q64347 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn1Q64347 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Clcn1Q64347 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC20.24■□□□□ 0.83
Clcn1Q64347 Gm7222-201ENSMUST00000117512 906 ntBASIC20.24■□□□□ 0.83
Clcn1Q64347 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC20.24■□□□□ 0.83
Clcn1Q64347 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC20.24■□□□□ 0.83
Clcn1Q64347 Gm2756-201ENSMUST00000195851 400 ntBASIC20.24■□□□□ 0.83
Clcn1Q64347 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.24■□□□□ 0.83
Clcn1Q64347 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn1Q64347 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn1Q64347 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.24■□□□□ 0.83
Clcn1Q64347 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn1Q64347 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Clcn1Q64347 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn1Q64347 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn1Q64347 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcn1Q64347 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn1Q64347 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn1Q64347 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn1Q64347 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn1Q64347 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn1Q64347 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Clcn1Q64347 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.23■□□□□ 0.83
Clcn1Q64347 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Clcn1Q64347 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC20.23■□□□□ 0.83
Clcn1Q64347 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC20.23■□□□□ 0.83
Clcn1Q64347 Gm18622-201ENSMUST00000219361 595 ntBASIC20.23■□□□□ 0.83
Clcn1Q64347 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcn1Q64347 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.23■□□□□ 0.83
Clcn1Q64347 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC20.23■□□□□ 0.83
Clcn1Q64347 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Clcn1Q64347 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn1Q64347 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn1Q64347 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn1Q64347 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn1Q64347 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn1Q64347 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC20.22■□□□□ 0.83
Clcn1Q64347 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC20.22■□□□□ 0.83
Clcn1Q64347 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC20.22■□□□□ 0.83
Clcn1Q64347 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn1Q64347 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn1Q64347 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Clcn1Q64347 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn1Q64347 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcn1Q64347 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Clcn1Q64347 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn1Q64347 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Clcn1Q64347 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn1Q64347 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Clcn1Q64347 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.21■□□□□ 0.83
Clcn1Q64347 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Clcn1Q64347 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20.21■□□□□ 0.83
Clcn1Q64347 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn1Q64347 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn1Q64347 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn1Q64347 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn1Q64347 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.21■□□□□ 0.83
Clcn1Q64347 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn1Q64347 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn1Q64347 Gm5648-201ENSMUST00000122244 1587 ntBASIC20.21■□□□□ 0.83
Clcn1Q64347 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn1Q64347 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn1Q64347 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.2■□□□□ 0.82
Clcn1Q64347 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn1Q64347 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC20.2■□□□□ 0.82
Clcn1Q64347 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn1Q64347 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn1Q64347 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn1Q64347 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC20.2■□□□□ 0.82
Clcn1Q64347 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn1Q64347 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn1Q64347 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Clcn1Q64347 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn1Q64347 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn1Q64347 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC20.19■□□□□ 0.82
Clcn1Q64347 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn1Q64347 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn1Q64347 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn1Q64347 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Clcn1Q64347 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn1Q64347 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn1Q64347 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Clcn1Q64347 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn1Q64347 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms