Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col7a1Q63870 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col7a1Q63870 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col7a1Q63870 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col7a1Q63870 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col7a1Q63870 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col7a1Q63870 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col7a1Q63870 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.21□□□□□ -0.3
Col7a1Q63870 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.21□□□□□ -0.3
Col7a1Q63870 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.21□□□□□ -0.3
Col7a1Q63870 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.21□□□□□ -0.3
Col7a1Q63870 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Col7a1Q63870 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.3
Col7a1Q63870 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col7a1Q63870 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col7a1Q63870 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col7a1Q63870 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.2□□□□□ -0.3
Col7a1Q63870 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col7a1Q63870 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col7a1Q63870 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.2□□□□□ -0.3
Col7a1Q63870 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Col7a1Q63870 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col7a1Q63870 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col7a1Q63870 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col7a1Q63870 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col7a1Q63870 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.2□□□□□ -0.3
Col7a1Q63870 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Col7a1Q63870 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.2□□□□□ -0.3
Col7a1Q63870 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col7a1Q63870 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.2□□□□□ -0.3
Col7a1Q63870 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col7a1Q63870 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col7a1Q63870 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.2□□□□□ -0.3
Col7a1Q63870 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Col7a1Q63870 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col7a1Q63870 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col7a1Q63870 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col7a1Q63870 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col7a1Q63870 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col7a1Q63870 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col7a1Q63870 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.19□□□□□ -0.3
Col7a1Q63870 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col7a1Q63870 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col7a1Q63870 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.19□□□□□ -0.3
Col7a1Q63870 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Col7a1Q63870 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col7a1Q63870 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col7a1Q63870 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col7a1Q63870 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col7a1Q63870 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.19□□□□□ -0.3
Col7a1Q63870 Gm12008-201ENSMUST00000117791 755 ntBASIC13.19□□□□□ -0.3
Col7a1Q63870 Gm14767-201ENSMUST00000121559 586 ntBASIC13.19□□□□□ -0.3
Col7a1Q63870 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col7a1Q63870 Gm9908-201ENSMUST00000211534 448 ntBASIC13.19□□□□□ -0.3
Col7a1Q63870 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col7a1Q63870 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col7a1Q63870 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col7a1Q63870 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col7a1Q63870 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col7a1Q63870 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col7a1Q63870 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col7a1Q63870 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.19□□□□□ -0.3
Col7a1Q63870 Gm22189-201ENSMUST00000103822 86 ntBASIC13.19□□□□□ -0.3
Col7a1Q63870 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col7a1Q63870 Gm27838-201ENSMUST00000184829 128 ntBASIC13.19□□□□□ -0.3
Col7a1Q63870 Gm29667-201ENSMUST00000190817 490 ntBASIC13.19□□□□□ -0.3
Col7a1Q63870 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col7a1Q63870 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col7a1Q63870 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col7a1Q63870 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.18□□□□□ -0.3
Col7a1Q63870 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col7a1Q63870 Gm14042-201ENSMUST00000120139 833 ntBASIC13.18□□□□□ -0.3
Col7a1Q63870 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.18□□□□□ -0.3
Col7a1Q63870 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col7a1Q63870 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col7a1Q63870 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col7a1Q63870 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col7a1Q63870 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col7a1Q63870 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col7a1Q63870 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.18□□□□□ -0.3
Col7a1Q63870 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col7a1Q63870 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col7a1Q63870 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Col7a1Q63870 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col7a1Q63870 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.18□□□□□ -0.3
Col7a1Q63870 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col7a1Q63870 Gm15198-201ENSMUST00000117283 177 ntBASIC13.18□□□□□ -0.3
Col7a1Q63870 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.18□□□□□ -0.3
Col7a1Q63870 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.18□□□□□ -0.3
Col7a1Q63870 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.18□□□□□ -0.3
Col7a1Q63870 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.18□□□□□ -0.3
Col7a1Q63870 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col7a1Q63870 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.18□□□□□ -0.3
Col7a1Q63870 Gm10154-201ENSMUST00000084445 354 ntBASIC13.18□□□□□ -0.3
Col7a1Q63870 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col7a1Q63870 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col7a1Q63870 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col7a1Q63870 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col7a1Q63870 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.18□□□□□ -0.3
Col7a1Q63870 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms