Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
VcanQ62059 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.99□□□□□ -0.01
VcanQ62059 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcanQ62059 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VcanQ62059 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcanQ62059 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VcanQ62059 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.99□□□□□ -0.01
VcanQ62059 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
VcanQ62059 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
VcanQ62059 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcanQ62059 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.99□□□□□ -0.01
VcanQ62059 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.99□□□□□ -0.01
VcanQ62059 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VcanQ62059 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VcanQ62059 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.99□□□□□ -0.01
VcanQ62059 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcanQ62059 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcanQ62059 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VcanQ62059 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
VcanQ62059 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcanQ62059 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcanQ62059 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.98□□□□□ -0.01
VcanQ62059 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcanQ62059 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VcanQ62059 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcanQ62059 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcanQ62059 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcanQ62059 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
VcanQ62059 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.98□□□□□ -0.01
VcanQ62059 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VcanQ62059 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VcanQ62059 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VcanQ62059 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcanQ62059 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcanQ62059 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcanQ62059 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcanQ62059 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VcanQ62059 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VcanQ62059 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VcanQ62059 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VcanQ62059 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
VcanQ62059 Mir7684-201ENSMUST00000183858 60 ntBASIC14.97□□□□□ -0.01
VcanQ62059 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.97□□□□□ -0.01
VcanQ62059 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VcanQ62059 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VcanQ62059 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VcanQ62059 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VcanQ62059 Gm14719-201ENSMUST00000121891 340 ntBASIC14.97□□□□□ -0.01
VcanQ62059 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.97□□□□□ -0.01
VcanQ62059 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VcanQ62059 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VcanQ62059 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.97□□□□□ -0.01
VcanQ62059 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VcanQ62059 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.96□□□□□ -0.01
VcanQ62059 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.96□□□□□ -0.01
VcanQ62059 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
VcanQ62059 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.96□□□□□ -0.01
VcanQ62059 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.96□□□□□ -0.01
VcanQ62059 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.96□□□□□ -0.01
VcanQ62059 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VcanQ62059 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VcanQ62059 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.96□□□□□ -0.01
VcanQ62059 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VcanQ62059 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
VcanQ62059 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
VcanQ62059 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VcanQ62059 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VcanQ62059 Gm37153-201ENSMUST00000193637 231 ntBASIC14.96□□□□□ -0.01
VcanQ62059 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.96□□□□□ -0.01
VcanQ62059 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VcanQ62059 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VcanQ62059 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VcanQ62059 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VcanQ62059 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VcanQ62059 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VcanQ62059 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
VcanQ62059 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.96□□□□□ -0.02
VcanQ62059 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC14.96□□□□□ -0.02
VcanQ62059 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
VcanQ62059 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
VcanQ62059 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VcanQ62059 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
VcanQ62059 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VcanQ62059 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VcanQ62059 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VcanQ62059 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VcanQ62059 Gm7730-201ENSMUST00000212486 454 ntBASIC14.95□□□□□ -0.02
VcanQ62059 Thap2-203ENSMUST00000218989 527 ntBASIC14.95□□□□□ -0.02
VcanQ62059 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
VcanQ62059 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VcanQ62059 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
VcanQ62059 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VcanQ62059 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.95□□□□□ -0.02
VcanQ62059 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VcanQ62059 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.95□□□□□ -0.02
VcanQ62059 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
VcanQ62059 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VcanQ62059 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VcanQ62059 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VcanQ62059 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms