Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.87■□□□□ 0.45
Col11a1Q61245 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col11a1Q61245 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col11a1Q61245 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col11a1Q61245 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col11a1Q61245 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col11a1Q61245 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col11a1Q61245 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.87■□□□□ 0.45
Col11a1Q61245 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.87■□□□□ 0.45
Col11a1Q61245 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.87■□□□□ 0.45
Col11a1Q61245 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Col11a1Q61245 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col11a1Q61245 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col11a1Q61245 Gm25287-201ENSMUST00000103846 110 ntBASIC17.86■□□□□ 0.45
Col11a1Q61245 Gm22918-201ENSMUST00000103855 110 ntBASIC17.86■□□□□ 0.45
Col11a1Q61245 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.86■□□□□ 0.45
Col11a1Q61245 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col11a1Q61245 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col11a1Q61245 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col11a1Q61245 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col11a1Q61245 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col11a1Q61245 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col11a1Q61245 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col11a1Q61245 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col11a1Q61245 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.86■□□□□ 0.45
Col11a1Q61245 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col11a1Q61245 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.86■□□□□ 0.45
Col11a1Q61245 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.86■□□□□ 0.45
Col11a1Q61245 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Col11a1Q61245 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col11a1Q61245 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col11a1Q61245 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col11a1Q61245 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col11a1Q61245 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col11a1Q61245 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
Col11a1Q61245 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.85■□□□□ 0.45
Col11a1Q61245 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col11a1Q61245 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col11a1Q61245 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Col11a1Q61245 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Col11a1Q61245 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Col11a1Q61245 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col11a1Q61245 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col11a1Q61245 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col11a1Q61245 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col11a1Q61245 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Col11a1Q61245 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col11a1Q61245 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col11a1Q61245 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Col11a1Q61245 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col11a1Q61245 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Col11a1Q61245 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col11a1Q61245 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Col11a1Q61245 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.84■□□□□ 0.45
Col11a1Q61245 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col11a1Q61245 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col11a1Q61245 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.84■□□□□ 0.45
Col11a1Q61245 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col11a1Q61245 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.84■□□□□ 0.45
Col11a1Q61245 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Col11a1Q61245 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col11a1Q61245 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col11a1Q61245 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Col11a1Q61245 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col11a1Q61245 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col11a1Q61245 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Col11a1Q61245 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col11a1Q61245 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col11a1Q61245 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Col11a1Q61245 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.83■□□□□ 0.44
Col11a1Q61245 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.83■□□□□ 0.44
Col11a1Q61245 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col11a1Q61245 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Col11a1Q61245 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col11a1Q61245 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col11a1Q61245 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col11a1Q61245 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col11a1Q61245 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.83■□□□□ 0.44
Col11a1Q61245 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col11a1Q61245 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.83■□□□□ 0.44
Col11a1Q61245 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col11a1Q61245 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.82■□□□□ 0.44
Col11a1Q61245 Gm15693-201ENSMUST00000120470 637 ntBASIC17.82■□□□□ 0.44
Col11a1Q61245 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.82■□□□□ 0.44
Col11a1Q61245 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col11a1Q61245 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col11a1Q61245 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.82■□□□□ 0.44
Col11a1Q61245 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col11a1Q61245 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col11a1Q61245 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col11a1Q61245 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col11a1Q61245 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col11a1Q61245 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col11a1Q61245 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col11a1Q61245 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.82■□□□□ 0.44
Col11a1Q61245 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Col11a1Q61245 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.82■□□□□ 0.44
Col11a1Q61245 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col11a1Q61245 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col11a1Q61245 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms