Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Clns1aQ61189 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Clns1aQ61189 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.78□□□□□ -0.2
Clns1aQ61189 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Clns1aQ61189 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.78□□□□□ -0.2
Clns1aQ61189 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.78□□□□□ -0.2
Clns1aQ61189 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Clns1aQ61189 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Clns1aQ61189 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clns1aQ61189 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clns1aQ61189 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clns1aQ61189 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.2
Clns1aQ61189 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Clns1aQ61189 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.77□□□□□ -0.21
Clns1aQ61189 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clns1aQ61189 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clns1aQ61189 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Clns1aQ61189 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.77□□□□□ -0.21
Clns1aQ61189 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clns1aQ61189 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Clns1aQ61189 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.77□□□□□ -0.21
Clns1aQ61189 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.77□□□□□ -0.21
Clns1aQ61189 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.77□□□□□ -0.21
Clns1aQ61189 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clns1aQ61189 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clns1aQ61189 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clns1aQ61189 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clns1aQ61189 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Clns1aQ61189 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.77□□□□□ -0.21
Clns1aQ61189 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clns1aQ61189 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Clns1aQ61189 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Clns1aQ61189 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clns1aQ61189 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clns1aQ61189 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Clns1aQ61189 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clns1aQ61189 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clns1aQ61189 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Clns1aQ61189 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clns1aQ61189 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.76□□□□□ -0.21
Clns1aQ61189 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clns1aQ61189 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clns1aQ61189 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clns1aQ61189 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Clns1aQ61189 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clns1aQ61189 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clns1aQ61189 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clns1aQ61189 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clns1aQ61189 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clns1aQ61189 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
Clns1aQ61189 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clns1aQ61189 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clns1aQ61189 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.76□□□□□ -0.21
Clns1aQ61189 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.76□□□□□ -0.21
Clns1aQ61189 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clns1aQ61189 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clns1aQ61189 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Clns1aQ61189 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clns1aQ61189 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clns1aQ61189 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clns1aQ61189 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clns1aQ61189 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clns1aQ61189 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clns1aQ61189 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clns1aQ61189 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clns1aQ61189 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clns1aQ61189 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clns1aQ61189 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clns1aQ61189 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clns1aQ61189 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Clns1aQ61189 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clns1aQ61189 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Clns1aQ61189 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clns1aQ61189 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clns1aQ61189 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.75□□□□□ -0.21
Clns1aQ61189 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Clns1aQ61189 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Clns1aQ61189 Gm27405-201ENSMUST00000184201 112 ntBASIC13.75□□□□□ -0.21
Clns1aQ61189 Gm9731-201ENSMUST00000209480 747 ntBASIC13.75□□□□□ -0.21
Clns1aQ61189 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clns1aQ61189 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clns1aQ61189 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms