Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln3Q61124 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln3Q61124 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cln3Q61124 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cln3Q61124 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln3Q61124 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln3Q61124 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln3Q61124 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.53■□□□□ 0.4
Cln3Q61124 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln3Q61124 Grk6-207ENSMUST00000225925 2769 ntBASIC17.53■□□□□ 0.4
Cln3Q61124 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln3Q61124 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cln3Q61124 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Cln3Q61124 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cln3Q61124 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln3Q61124 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln3Q61124 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cln3Q61124 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln3Q61124 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cln3Q61124 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cln3Q61124 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.53■□□□□ 0.4
Cln3Q61124 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.53■□□□□ 0.4
Cln3Q61124 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln3Q61124 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln3Q61124 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln3Q61124 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln3Q61124 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cln3Q61124 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln3Q61124 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln3Q61124 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cln3Q61124 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cln3Q61124 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Cln3Q61124 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cln3Q61124 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cln3Q61124 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cln3Q61124 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cln3Q61124 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cln3Q61124 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.52■□□□□ 0.4
Cln3Q61124 Gm44492-201ENSMUST00000197012 141 ntBASIC17.52■□□□□ 0.4
Cln3Q61124 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.52■□□□□ 0.4
Cln3Q61124 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.52■□□□□ 0.4
Cln3Q61124 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.52■□□□□ 0.4
Cln3Q61124 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Cln3Q61124 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cln3Q61124 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cln3Q61124 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cln3Q61124 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Cln3Q61124 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cln3Q61124 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Cln3Q61124 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cln3Q61124 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Cln3Q61124 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cln3Q61124 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cln3Q61124 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cln3Q61124 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.52■□□□□ 0.39
Cln3Q61124 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cln3Q61124 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cln3Q61124 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.52■□□□□ 0.39
Cln3Q61124 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cln3Q61124 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cln3Q61124 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cln3Q61124 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Cln3Q61124 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cln3Q61124 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cln3Q61124 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cln3Q61124 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cln3Q61124 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cln3Q61124 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.51■□□□□ 0.39
Cln3Q61124 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cln3Q61124 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cln3Q61124 Auts2-212ENSMUST00000178555 309 ntBASIC17.51■□□□□ 0.39
Cln3Q61124 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.51■□□□□ 0.39
Cln3Q61124 Gm9682-201ENSMUST00000197505 556 ntBASIC17.51■□□□□ 0.39
Cln3Q61124 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.51■□□□□ 0.39
Cln3Q61124 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cln3Q61124 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cln3Q61124 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cln3Q61124 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cln3Q61124 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cln3Q61124 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cln3Q61124 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cln3Q61124 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cln3Q61124 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cln3Q61124 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cln3Q61124 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cln3Q61124 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.5■□□□□ 0.39
Cln3Q61124 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cln3Q61124 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.5■□□□□ 0.39
Cln3Q61124 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cln3Q61124 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cln3Q61124 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cln3Q61124 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cln3Q61124 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cln3Q61124 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cln3Q61124 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.5■□□□□ 0.39
Cln3Q61124 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cln3Q61124 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cln3Q61124 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cln3Q61124 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cln3Q61124 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms