Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a4Q60857 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a4Q60857 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Slc6a4Q60857 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a4Q60857 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a4Q60857 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Slc6a4Q60857 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a4Q60857 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a4Q60857 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a4Q60857 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a4Q60857 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a4Q60857 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a4Q60857 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a4Q60857 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a4Q60857 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Slc6a4Q60857 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a4Q60857 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a4Q60857 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Slc6a4Q60857 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a4Q60857 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a4Q60857 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a4Q60857 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a4Q60857 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a4Q60857 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a4Q60857 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Slc6a4Q60857 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a4Q60857 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a4Q60857 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a4Q60857 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a4Q60857 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a4Q60857 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a4Q60857 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a4Q60857 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.38■□□□□ 0.21
Slc6a4Q60857 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.38■□□□□ 0.21
Slc6a4Q60857 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a4Q60857 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Slc6a4Q60857 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a4Q60857 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a4Q60857 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a4Q60857 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Slc6a4Q60857 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a4Q60857 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Slc6a4Q60857 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a4Q60857 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a4Q60857 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc6a4Q60857 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.38■□□□□ 0.21
Slc6a4Q60857 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.38■□□□□ 0.21
Slc6a4Q60857 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a4Q60857 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a4Q60857 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Slc6a4Q60857 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Slc6a4Q60857 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.37■□□□□ 0.21
Slc6a4Q60857 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a4Q60857 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a4Q60857 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.37■□□□□ 0.21
Slc6a4Q60857 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.37■□□□□ 0.21
Slc6a4Q60857 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.37■□□□□ 0.21
Slc6a4Q60857 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.37■□□□□ 0.21
Slc6a4Q60857 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.37■□□□□ 0.21
Slc6a4Q60857 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.37■□□□□ 0.21
Slc6a4Q60857 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a4Q60857 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.37■□□□□ 0.21
Slc6a4Q60857 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.37■□□□□ 0.21
Slc6a4Q60857 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.37■□□□□ 0.21
Slc6a4Q60857 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a4Q60857 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.37■□□□□ 0.21
Slc6a4Q60857 Gm8825-201ENSMUST00000182565 998 ntBASIC16.37■□□□□ 0.21
Slc6a4Q60857 Gm4518-201ENSMUST00000182638 718 ntBASIC16.37■□□□□ 0.21
Slc6a4Q60857 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.37■□□□□ 0.21
Slc6a4Q60857 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.37■□□□□ 0.21
Slc6a4Q60857 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.37■□□□□ 0.21
Slc6a4Q60857 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.37■□□□□ 0.21
Slc6a4Q60857 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a4Q60857 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.37■□□□□ 0.21
Slc6a4Q60857 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.37■□□□□ 0.21
Slc6a4Q60857 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.37■□□□□ 0.21
Slc6a4Q60857 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Slc6a4Q60857 Haglr-201ENSMUST00000100000 2085 ntBASIC16.37■□□□□ 0.21
Slc6a4Q60857 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a4Q60857 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a4Q60857 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Slc6a4Q60857 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Slc6a4Q60857 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a4Q60857 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a4Q60857 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc6a4Q60857 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a4Q60857 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a4Q60857 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a4Q60857 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a4Q60857 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a4Q60857 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Slc6a4Q60857 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.36■□□□□ 0.21
Slc6a4Q60857 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a4Q60857 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.36■□□□□ 0.21
Slc6a4Q60857 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Slc6a4Q60857 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Slc6a4Q60857 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc6a4Q60857 AW822252-206ENSMUST00000208904 237 ntBASIC16.36■□□□□ 0.21
Slc6a4Q60857 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.36■□□□□ 0.21
Slc6a4Q60857 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms