Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.76■□□□□ 0.11
Col12a1Q60847 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.76■□□□□ 0.11
Col12a1Q60847 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.76■□□□□ 0.11
Col12a1Q60847 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.76■□□□□ 0.11
Col12a1Q60847 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.76■□□□□ 0.11
Col12a1Q60847 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.76■□□□□ 0.11
Col12a1Q60847 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.76■□□□□ 0.11
Col12a1Q60847 Gm4518-201ENSMUST00000182638 718 ntBASIC15.76■□□□□ 0.11
Col12a1Q60847 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.76■□□□□ 0.11
Col12a1Q60847 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.76■□□□□ 0.11
Col12a1Q60847 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col12a1Q60847 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.76■□□□□ 0.11
Col12a1Q60847 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.76■□□□□ 0.11
Col12a1Q60847 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.76■□□□□ 0.11
Col12a1Q60847 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.76■□□□□ 0.11
Col12a1Q60847 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col12a1Q60847 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.76■□□□□ 0.11
Col12a1Q60847 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col12a1Q60847 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col12a1Q60847 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col12a1Q60847 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col12a1Q60847 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col12a1Q60847 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col12a1Q60847 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col12a1Q60847 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.75■□□□□ 0.11
Col12a1Q60847 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col12a1Q60847 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.75■□□□□ 0.11
Col12a1Q60847 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col12a1Q60847 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Col12a1Q60847 Gm7774-201ENSMUST00000200064 533 ntBASIC15.75■□□□□ 0.11
Col12a1Q60847 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col12a1Q60847 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col12a1Q60847 Mir7684-201ENSMUST00000183858 60 ntBASIC15.74■□□□□ 0.11
Col12a1Q60847 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col12a1Q60847 Gm9794-201ENSMUST00000202370 423 ntBASIC15.74■□□□□ 0.11
Col12a1Q60847 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.74■□□□□ 0.11
Col12a1Q60847 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.74■□□□□ 0.11
Col12a1Q60847 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col12a1Q60847 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col12a1Q60847 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col12a1Q60847 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col12a1Q60847 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.74■□□□□ 0.11
Col12a1Q60847 Gm24158-201ENSMUST00000175263 71 ntBASIC15.74■□□□□ 0.11
Col12a1Q60847 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.74■□□□□ 0.11
Col12a1Q60847 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col12a1Q60847 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col12a1Q60847 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col12a1Q60847 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col12a1Q60847 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col12a1Q60847 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Col12a1Q60847 Gm14719-201ENSMUST00000121891 340 ntBASIC15.74■□□□□ 0.11
Col12a1Q60847 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col12a1Q60847 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col12a1Q60847 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Col12a1Q60847 Gm9899-201ENSMUST00000065519 555 ntBASIC15.74■□□□□ 0.11
Col12a1Q60847 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col12a1Q60847 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col12a1Q60847 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col12a1Q60847 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col12a1Q60847 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col12a1Q60847 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Col12a1Q60847 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col12a1Q60847 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.73■□□□□ 0.11
Col12a1Q60847 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Col12a1Q60847 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.73■□□□□ 0.11
Col12a1Q60847 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col12a1Q60847 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col12a1Q60847 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col12a1Q60847 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col12a1Q60847 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Col12a1Q60847 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Col12a1Q60847 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Col12a1Q60847 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col12a1Q60847 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col12a1Q60847 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col12a1Q60847 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Col12a1Q60847 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col12a1Q60847 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col12a1Q60847 Gm17837-201ENSMUST00000186435 985 ntBASIC15.72■□□□□ 0.11
Col12a1Q60847 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.72■□□□□ 0.11
Col12a1Q60847 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Col12a1Q60847 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Gm44855-201ENSMUST00000205725 362 ntBASIC15.72■□□□□ 0.11
Col12a1Q60847 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col12a1Q60847 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Col12a1Q60847 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms