Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5d-4Q5R1F6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
Trav5d-4Q5R1F6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Trav5d-4Q5R1F6 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
Trav5d-4Q5R1F6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5d-4Q5R1F6 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5d-4Q5R1F6 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5d-4Q5R1F6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5d-4Q5R1F6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5d-4Q5R1F6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav5d-4Q5R1F6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav5d-4Q5R1F6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.83□□□□□ -0.2
Trav5d-4Q5R1F6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5d-4Q5R1F6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5d-4Q5R1F6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5d-4Q5R1F6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav5d-4Q5R1F6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav5d-4Q5R1F6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav5d-4Q5R1F6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5d-4Q5R1F6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav5d-4Q5R1F6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5d-4Q5R1F6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Mir770-201ENSMUST00000103252 94 ntBASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Mir7071-201ENSMUST00000184847 69 ntBASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5d-4Q5R1F6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.81□□□□□ -0.2
Trav5d-4Q5R1F6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms