Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-3Q5R1E6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav6-3Q5R1E6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Trav6-3Q5R1E6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6-3Q5R1E6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6-3Q5R1E6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Gm27389-201ENSMUST00000183622 195 ntBASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Gm7889-201ENSMUST00000185591 958 ntBASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-3Q5R1E6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Asic1-205ENSMUST00000228185 1818 ntBASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-3Q5R1E6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms