Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.1□□□□□ -0.47
Trav3-3Q5R1C3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Gm38285-201ENSMUST00000192928 922 ntBASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav3-3Q5R1C3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav3-3Q5R1C3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav3-3Q5R1C3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Trav3-3Q5R1C3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Gm6365-201ENSMUST00000054711 744 ntBASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms