Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-2Q5R1B6 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.6■□□□□ 0.09
Trav8d-2Q5R1B6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-2Q5R1B6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-2Q5R1B6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-2Q5R1B6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-2Q5R1B6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-2Q5R1B6 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav8d-2Q5R1B6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-2Q5R1B6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav8d-2Q5R1B6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav8d-2Q5R1B6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Trav8d-2Q5R1B6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav8d-2Q5R1B6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav8d-2Q5R1B6 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav8d-2Q5R1B6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav8d-2Q5R1B6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.58■□□□□ 0.09
Trav8d-2Q5R1B6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Trav8d-2Q5R1B6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Trav8d-2Q5R1B6 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Gm15427-201ENSMUST00000117288 531 ntBASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Gm45612-201ENSMUST00000211320 160 ntBASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Trav8d-2Q5R1B6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Gm13597-201ENSMUST00000121239 375 ntBASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Gm44335-201ENSMUST00000196879 141 ntBASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Gm44297-201ENSMUST00000198304 141 ntBASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Gm44346-201ENSMUST00000198851 141 ntBASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Gm19164-201ENSMUST00000210667 640 ntBASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav8d-2Q5R1B6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8d-2Q5R1B6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.56■□□□□ 0.08
Trav8d-2Q5R1B6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8d-2Q5R1B6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav8d-2Q5R1B6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.56■□□□□ 0.08
Trav8d-2Q5R1B6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8d-2Q5R1B6 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8d-2Q5R1B6 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.56■□□□□ 0.08
Trav8d-2Q5R1B6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav8d-2Q5R1B6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms