Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.55■□□□□ 0.4
Scarf1Q5ND28 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scarf1Q5ND28 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scarf1Q5ND28 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scarf1Q5ND28 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scarf1Q5ND28 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scarf1Q5ND28 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Scarf1Q5ND28 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scarf1Q5ND28 Gm43347-201ENSMUST00000200226 580 ntBASIC17.55■□□□□ 0.4
Scarf1Q5ND28 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Scarf1Q5ND28 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scarf1Q5ND28 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scarf1Q5ND28 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scarf1Q5ND28 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scarf1Q5ND28 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scarf1Q5ND28 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scarf1Q5ND28 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scarf1Q5ND28 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scarf1Q5ND28 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Scarf1Q5ND28 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scarf1Q5ND28 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Gm37319-201ENSMUST00000193500 636 ntBASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scarf1Q5ND28 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scarf1Q5ND28 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scarf1Q5ND28 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scarf1Q5ND28 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scarf1Q5ND28 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scarf1Q5ND28 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scarf1Q5ND28 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Scarf1Q5ND28 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scarf1Q5ND28 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.53■□□□□ 0.4
Scarf1Q5ND28 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scarf1Q5ND28 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.53■□□□□ 0.4
Scarf1Q5ND28 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scarf1Q5ND28 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Scarf1Q5ND28 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scarf1Q5ND28 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scarf1Q5ND28 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scarf1Q5ND28 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scarf1Q5ND28 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scarf1Q5ND28 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Scarf1Q5ND28 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Gm44357-201ENSMUST00000195897 142 ntBASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Gm19658-201ENSMUST00000196231 138 ntBASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Gm44367-201ENSMUST00000196836 138 ntBASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Gm44350-201ENSMUST00000197197 138 ntBASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Gm44390-201ENSMUST00000197533 144 ntBASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Gm44313-201ENSMUST00000198018 138 ntBASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Gm44486-201ENSMUST00000198508 138 ntBASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Gm44314-201ENSMUST00000199263 138 ntBASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Gm44394-201ENSMUST00000199558 138 ntBASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Gm44484-201ENSMUST00000199873 138 ntBASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Gm44466-201ENSMUST00000200264 138 ntBASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Gm44359-201ENSMUST00000200671 138 ntBASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scarf1Q5ND28 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scarf1Q5ND28 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Scarf1Q5ND28 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scarf1Q5ND28 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms