Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
R3hdm4Q4VBF2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3hdm4Q4VBF2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
R3hdm4Q4VBF2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3hdm4Q4VBF2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
R3hdm4Q4VBF2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3hdm4Q4VBF2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
R3hdm4Q4VBF2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3hdm4Q4VBF2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3hdm4Q4VBF2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.29■□□□□ 0.36
R3hdm4Q4VBF2 Gm25406-201ENSMUST00000157599 105 ntBASIC17.29■□□□□ 0.36
R3hdm4Q4VBF2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
R3hdm4Q4VBF2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.29■□□□□ 0.36
R3hdm4Q4VBF2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3hdm4Q4VBF2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3hdm4Q4VBF2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3hdm4Q4VBF2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3hdm4Q4VBF2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3hdm4Q4VBF2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
R3hdm4Q4VBF2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
R3hdm4Q4VBF2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Gm12644-201ENSMUST00000119935 606 ntBASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Gm7506-201ENSMUST00000207758 815 ntBASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
R3hdm4Q4VBF2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
R3hdm4Q4VBF2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
R3hdm4Q4VBF2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
R3hdm4Q4VBF2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
R3hdm4Q4VBF2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
R3hdm4Q4VBF2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.27■□□□□ 0.36
R3hdm4Q4VBF2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
R3hdm4Q4VBF2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
R3hdm4Q4VBF2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
R3hdm4Q4VBF2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
R3hdm4Q4VBF2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
R3hdm4Q4VBF2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.27■□□□□ 0.36
R3hdm4Q4VBF2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
R3hdm4Q4VBF2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
R3hdm4Q4VBF2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
R3hdm4Q4VBF2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
R3hdm4Q4VBF2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
R3hdm4Q4VBF2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
R3hdm4Q4VBF2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
R3hdm4Q4VBF2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
R3hdm4Q4VBF2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
R3hdm4Q4VBF2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
R3hdm4Q4VBF2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
R3hdm4Q4VBF2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
R3hdm4Q4VBF2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.27■□□□□ 0.35
R3hdm4Q4VBF2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.27■□□□□ 0.35
R3hdm4Q4VBF2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
R3hdm4Q4VBF2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
R3hdm4Q4VBF2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.26■□□□□ 0.35
R3hdm4Q4VBF2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms