Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38aQ4FK66 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38aQ4FK66 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38aQ4FK66 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Prpf38aQ4FK66 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Prpf38aQ4FK66 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38aQ4FK66 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38aQ4FK66 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38aQ4FK66 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38aQ4FK66 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Prpf38aQ4FK66 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Prpf38aQ4FK66 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf38aQ4FK66 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf38aQ4FK66 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf38aQ4FK66 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf38aQ4FK66 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf38aQ4FK66 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf38aQ4FK66 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf38aQ4FK66 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.68■□□□□ 0.58
Prpf38aQ4FK66 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.68■□□□□ 0.58
Prpf38aQ4FK66 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.68■□□□□ 0.58
Prpf38aQ4FK66 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf38aQ4FK66 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf38aQ4FK66 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.68■□□□□ 0.58
Prpf38aQ4FK66 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf38aQ4FK66 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf38aQ4FK66 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf38aQ4FK66 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf38aQ4FK66 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf38aQ4FK66 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Prpf38aQ4FK66 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Gm6550-201ENSMUST00000187574 993 ntBASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf38aQ4FK66 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf38aQ4FK66 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf38aQ4FK66 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf38aQ4FK66 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf38aQ4FK66 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.66■□□□□ 0.58
Prpf38aQ4FK66 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Prpf38aQ4FK66 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.66■□□□□ 0.58
Prpf38aQ4FK66 AV026068-213ENSMUST00000223675 1171 ntBASIC18.66■□□□□ 0.58
Prpf38aQ4FK66 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf38aQ4FK66 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Prpf38aQ4FK66 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf38aQ4FK66 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf38aQ4FK66 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf38aQ4FK66 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf38aQ4FK66 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf38aQ4FK66 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf38aQ4FK66 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf38aQ4FK66 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 Gm15590-201ENSMUST00000078419 552 ntBASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prpf38aQ4FK66 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Prpf38aQ4FK66 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Prpf38aQ4FK66 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Prpf38aQ4FK66 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Prpf38aQ4FK66 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Prpf38aQ4FK66 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prpf38aQ4FK66 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms