Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.74□□□□□ -0.05
Spg11Q3UHA3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Spg11Q3UHA3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Gm9908-201ENSMUST00000211534 448 ntBASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Syt7-204ENSMUST00000223586 1344 ntBASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Gm12859-201ENSMUST00000117834 427 ntBASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Gm15824-201ENSMUST00000119516 955 ntBASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.73□□□□□ -0.05
Spg11Q3UHA3 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Spg11Q3UHA3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gm4518-201ENSMUST00000182638 718 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gm6218-201ENSMUST00000219812 628 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Mir6404-201ENSMUST00000183699 94 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Spg11Q3UHA3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Spg11Q3UHA3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Spg11Q3UHA3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Spg11Q3UHA3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.71□□□□□ -0.05
Spg11Q3UHA3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Spg11Q3UHA3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Spg11Q3UHA3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Spg11Q3UHA3 Gm6415-201ENSMUST00000118488 348 ntBASIC14.71□□□□□ -0.05
Spg11Q3UHA3 Gm15321-201ENSMUST00000121290 288 ntBASIC14.71□□□□□ -0.05
Spg11Q3UHA3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.71□□□□□ -0.05
Spg11Q3UHA3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Spg11Q3UHA3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.71□□□□□ -0.05
Spg11Q3UHA3 Gm18246-201ENSMUST00000221023 728 ntBASIC14.71□□□□□ -0.05
Spg11Q3UHA3 Gm9257-201ENSMUST00000221254 232 ntBASIC14.71□□□□□ -0.05
Spg11Q3UHA3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Spg11Q3UHA3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Spg11Q3UHA3 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.71□□□□□ -0.05
Spg11Q3UHA3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Spg11Q3UHA3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Spg11Q3UHA3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Spg11Q3UHA3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Spg11Q3UHA3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms