Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Khdc4Q3TCX3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Khdc4Q3TCX3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Gm15372-201ENSMUST00000120729 834 ntBASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Khdc4Q3TCX3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Khdc4Q3TCX3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms